Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology
Diffusion and Search Dynamics
5 artículos indexados
Este asunto y su jerarquía proceden de la clasificación OpenAlex, el catálogo abierto de la investigación científica mundial.
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- Stochastic Resetting Accelerates Reinforcement Learning Beyond Random Search
Jello Zhou, David J. Schwab, Vudtiwat Ngampruetikorn · 21 de julio de 2026
Stochastic resetting -- intermittently returning a process to a fixed reference state -- has emerged as an effective mechanism for optimizing first-passage properties. Existing theory largely treats processes that search but do not learn: the searcher follows fixed dynamics, accumulating no knowledg…
- One-step lowest-variance selection in a Gaussian random-field model motivated by masked diffusion: Total correlation and a square root collision threshold
Linjun Li · 21 de julio de 2026
Motivated by confidence-guided parallel unmasking in masked discrete diffusion, we study a single selection step in a stylized Gaussian random-field model. A locally dependent nonnegative score field represents position wise uncertainty, and the scheduler selects the K positions with the smallest sc…
- Plug-and-Play Guidance for Discrete Diffusion Models via Gradient-Informed Logit Correction
Hongkun Dou, Zike Chen, Fengji Li, Hongjue Li, Yue Deng · 5 de junio de 2026
Controllable generation with discrete diffusion models is often hindered by high computational overhead or the need for retraining. In this paper, we present \underline{\textbf{G}}radient-\underline{\textbf{I}}nformed \underline{\textbf{L}}ogit \underline{\textbf{C}}orrection (\textbf{GILC}), a plug…
- Constraint-Enhanced Physical Search through Correlation Matching
Song-Ju Kim · 4 de junio de 2026
Physical systems do not merely add noise to search processes; they impose constraints that generate structured correlations. We propose a principle of constraint-enhanced physical search in which temporal correlations in exploration are matched to constraint-induced spatial correlations in the updat…
- Ridge Regression from Poisson Resetting: A Renewal Perspective on Spectral Regularization
Petar Jolakoski · 29 de mayo de 2026
We connect stochastic resetting from non-equilibrium statistical physics with ridge regularization in statistical learning. For linear gradient flow, resetting to the origin at rate $r$ produces stationary mean $(X^\top X+rI)^{-1}X^\top y$, exactly the ridge estimator with penalty $\lambda=r$. This …
- Efficiency of Parallel and Restart Exploration Strategies in Model Free Stochastic Simulations
Ernesto Garcia, Paola Bermolen, Matthieu Jonckheere, Seva Shneer · 7 de mayo de 2026
We analyze the efficiency of parallelization and restart mechanisms for stochastic simulations in model-free settings, where the underlying system dynamics are unknown. Such settings are common in Reinforcement Learning (RL) and rare event estimation, where standard variance-reduction techniques lik…
- Almost Bayesian: The Fractal Dynamics of Stochastic Gradient Descent
Max Hennick, Stijn De Baerdemacker · 17 de marzo de 2026
We show that the behavior of stochastic gradient descent is related to Bayesian statistics by showing that SGD is effectively diffusion on a fractal landscape, where the fractal dimension can be accounted for in a purely Bayesian way. By doing this we show that SGD can be regarded as a modified Baye…
- Cost-Aware Diffusion Active Search
Arundhati Banerjee, Jeff Schneider · 24 de febrero de 2026
Active search for recovering objects of interest through online, adaptive decision making with autonomous agents requires trading off exploration of unknown environments with exploitation of prior observations in the search space. Prior work has proposed information gain and Thompson sampling based …
- Probabilistic Insights for Efficient Exploration Strategies in Reinforcement Learning
Ernesto Garcia, Paola Bermolen, Matthieu Jonckheere, Seva Shneer · 16 de enero de 2026
We investigate efficient exploration strategies of environments with unknown stochastic dynamics and sparse rewards. Specifically, we analyze first the impact of parallel simulations on the probability of reaching rare states within a finite time budget. Using simplified models based on random walks…
- Using Linearized Optimal Transport to Predict the Evolution of Stochastic Particle Systems
Nicholas Karris, Evangelos A. Nikitopoulos, Ioannis G. Kevrekidis, Seungjoon Lee, Alexander Cloninger · 18 de noviembre de 2025
We develop an Euler-type method to predict the evolution of a time-dependent probability measure without explicitly learning an operator that governs its evolution. We use linearized optimal transport theory to prove that the measure-valued analog of Euler's method is first-order accurate when the m…
